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STRINGSTRING
cl15935_1 protein (Zea mays) - STRING interaction network
"cl15935_1" - Stress-response A/B barrel domain-containing protein UP3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl15935_1Stress-response A/B barrel domain-containing protein UP3 (256 aa)    
Predicted Functional Partners:
pco110680
Peroxisome biogenesis factor 10 (387 aa)
 
     
    0.896
103648250
40S ribosomal protein S15; Uncharacterized protein ; Belongs to the universal ribosomal protein uS19 family (153 aa)
     
        0.818
103630932
annotation not available (249 aa)
     
        0.815
GRMZM2G007256_P02
Adhesive/proline-rich protein; Uncharacterized protein (86 aa)
     
        0.782
100191763
AP-3 complex subunit sigma-2; Uncharacterized protein ; Belongs to the adaptor complexes small subunit family (196 aa)
           
  0.754
GRMZM2G152100_P01
annotation not available (136 aa)
           
  0.534
GRMZM2G139624_P01
annotation not available (379 aa)
           
  0.534
100382459
Peroxidase; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (356 aa)
     
        0.527
AY110056
Protein trichome birefringence-like 26; Putative DUF231 domain containing family protein; Uncharacterized protein (417 aa)
           
  0.510
100272604
Protein trichome birefringence-like 26; Putative DUF231 domain containing family protein isoform 1; Putative DUF231 domain containing family protein isoform 2; Uncharacterized protein (456 aa)
           
  0.510
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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