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STRINGSTRING
GRMZM2G395853_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G395853_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G395853_P01annotation not available (142 aa)    
Predicted Functional Partners:
pco148683
50S ribosomal protein L4 (293 aa)
     
      0.970
100282262
Immature colon carcinoma transcript 1 protein (227 aa)
   
 
  0.926
umc1619
NADH ubiquinone oxidoreductase B14 subunit; Uncharacterized protein (132 aa)
     
        0.924
TIDP2716
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (122 aa)
   
 
  0.891
GRMZM2G028547_P01
annotation not available (76 aa)
   
 
  0.891
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity) (119 aa)
   
 
  0.891
100282004
NADH ubiquinone oxidoreductase B22-like subunit ; Belongs to the complex I LYR family (145 aa)
     
        0.888
100281274
39S ribosomal protein L47 isoform 1; 39S ribosomal protein L47 isoform 2; Uncharacterized protein (138 aa)
     
 
  0.872
rpl19
Ribosomal protein L19 (213 aa)
   
 
  0.871
GRMZM2G073495_P02
Pentatricopeptide repeat-containing protein (280 aa)
   
 
  0.871
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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