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Zm.39046 protein (Zea mays) - STRING interaction network
"Zm.39046" - Arginine decarboxylase 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.39046Arginine decarboxylase 1 (694 aa)    
Predicted Functional Partners:
GRMZM2G174671_P01
Hypothetical protein LOC100272721 (340 aa)
     
  0.911
GRMZM5G831308_P01
Arginase 1, mitochondrial-like (229 aa)
     
  0.908
tac931.17a
Agmatine deiminase (414 aa)
 
   
  0.826
spds2
Spermidine synthase (389 aa)
       
  0.781
GRMZM2G120578_P01
Spermidine synthase 1 (387 aa)
       
  0.758
pco081586c
Hypothetical protein LOC100279222 (387 aa)
       
  0.758
Zm.94986
LOC100282908 (318 aa)
       
  0.728
GRMZM2G051771_P02
Hypothetical protein LOC100272866 (333 aa)
       
  0.728
GRMZM2G140824_P01
Hypothetical protein LOC100274319 (412 aa)
         
  0.637
Zm.34804
Ornithine decarboxylase-like (487 aa)
         
  0.637
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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