STRINGSTRING
LOC542694 protein (Zea mays) - STRING interaction network
"LOC542694" - Thioesterase family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC542694Thioesterase family protein (169 aa)    
Predicted Functional Partners:
Zm.80866
Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a (723 aa)
   
  0.806
Zm.20668
Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2-like (718 aa)
   
  0.806
GRMZM2G176029_P01
Hypothetical protein LOC100216965 (361 aa)
         
  0.726
Zm.38896
Peptide transporter PTR2 (593 aa)
           
  0.720
GRMZM2G026523_P01
Peptide transporter PTR2 (597 aa)
           
  0.720
GRMZM2G012306_P01
Peptide transporter PTR2 (596 aa)
           
  0.720
Zm.162217
Wound/stress protein (187 aa)
           
  0.710
Zm.85749
Uncharacterized protein (199 aa)
   
 
  0.698
GRMZM5G883511_P01
Uncharacterized protein (482 aa)
   
 
  0.684
GRMZM2G449309_P01
Annotation not available (520 aa)
       
  0.649
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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