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tdsgR47A05 protein (Zea mays) - STRING interaction network
"tdsgR47A05" - Phospholipid-transporting ATPase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR47A05Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily (1306 aa)    
Predicted Functional Partners:
100192626
Uncharacterized protein; Vesicle transport v-SNARE 13; Vesicle transport v-SNARE 13 isoform 1; Vesicle transport v-SNARE 13 isoform 2; Vesicle transport v-SNARE 13 isoform 3 (241 aa)
           
  0.682
GRMZM2G412426_P01
annotation not available (279 aa)
           
  0.682
100280807
Uncharacterized protein; Vesicle transport v-SNARE 13 (221 aa)
           
  0.682
100191695
Vesicle transport v-SNARE 12 (221 aa)
           
  0.682
GRMZM5G871980_P01
SEC13 protein; SEC13-related protein; Uncharacterized protein ; Belongs to the WD repeat SEC13 family (305 aa)
       
 
  0.642
GRMZM2G127850_P01
SEC13 protein; SEC13-related protein; Uncharacterized protein (305 aa)
       
 
  0.642
100282624
SEC13 protein; SEC13-related protein; Uncharacterized protein ; Belongs to the WD repeat SEC13 family (305 aa)
       
 
  0.642
GRMZM5G897776_P01
annotation not available (98 aa)
         
  0.619
du1
Uncharacterized protein; Dull endosperm1 (1674 aa)
         
  0.619
GRMZM2G121612_P01
Starch synthase IIIb-1 (1191 aa)
         
  0.619
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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