STRINGSTRING
cl14796_1 protein (Zea mays) - STRING interaction network
"cl14796_1" - Hypothetical protein LOC100278717 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl14796_1Hypothetical protein LOC100278717 (246 aa)    
Predicted Functional Partners:
pco076382
Hypothetical protein LOC100272286 (307 aa)
     
        0.833
HMG7
Nucleosome/chromatin assembly factor D (212 aa)
     
        0.816
TIDP3470
Hypothetical protein LOC100192012 (339 aa)
     
        0.813
GRMZM2G450055_P01
Hypothetical protein LOC100304310 (729 aa)
     
        0.810
GRMZM2G139894_P01
Putative uncharacterized protein (957 aa)
     
        0.790
MCM6
Minichromosome maintenance protein (831 aa)
     
        0.789
Zm.85635
Putative uncharacterized protein ; The GINS complex plays an essential role in the initiation of DNA replication (219 aa)
     
        0.786
GRMZM2G376957_P01
Histone H3.2 (136 aa)
     
        0.786
H4C7
Histone H4 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
        0.773
GRMZM2G306258_P01
Histone H2B.4 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
     
        0.743
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (10%) [HD]