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Zm.6905 protein (Zea mays) - STRING interaction network
"Zm.6905" - Histone H1-like protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.6905Histone H1-like protein (297 aa)    
Predicted Functional Partners:
GRMZM2G355546_P01
Uncharacterized protein (979 aa)
           
  0.720
rbap1
Nucleosome/chromatin assembly factor C (1391 aa)
           
  0.720
Zm.78900
ATP-dependent RNA helicase DBP5-like (892 aa)
     
        0.485
PLTZ2
Hypothetical protein LOC100279056 (214 aa)
     
        0.468
GRMZM2G304548_P01
Trypsin/factor XIIA inhibitor Precursor (Hageman factor inhibitor)(CHFI); Potent inhibitor of mammalian trypsin and a specific inhibitor of factor XIIa (activated hageman factor) (185 aa)
     
        0.460
GRMZM2G095084_P02
Uncharacterized protein (623 aa)
           
  0.453
gzr1
Glutelin-2 Precursor (Zein-gamma)(27 kDa zein)(Zein Zc2)(Alcohol-soluble reduced glutelin)(ASG); Seed storage protein. It accounts for about 15% of the total endosperm protein content (223 aa)
     
        0.437
Zm.102086
Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (148 aa)
           
  0.429
trh1
Thioredoxin h homolog1 ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (148 aa)
           
  0.429
GRMZM2G386155_P01
Hypothetical protein LOC100193762 (477 aa)
     
        0.420
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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