STRINGSTRING
Zm.58717 protein (Zea mays) - STRING interaction network
"Zm.58717" - pre-mRNA-processing factor 6-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.58717pre-mRNA-processing factor 6-like (956 aa)    
Predicted Functional Partners:
Zm.10872
DEAD-box ATP-dependent RNA helicase 22 (664 aa)
     
  0.996
GRMZM2G410393_P01
Hypothetical protein LOC100277544 (1280 aa)
     
  0.991
Zm.32975
Uncharacterized protein (1280 aa)
     
  0.991
GRMZM2G003307_P01
Hypothetical protein LOC100194058 (485 aa)
     
  0.990
GRMZM2G178227_P01
Hypothetical protein LOC100217051 (504 aa)
     
  0.988
Zm.2167
Putative uncharacterized protein (831 aa)
     
  0.986
GRMZM2G101689_P01
Hypothetical protein LOC100279862 (525 aa)
     
  0.986
GRMZM2G375172_P01
Hypothetical protein LOC100217215 (861 aa)
     
  0.986
GRMZM2G126141_P01
Hypothetical protein LOC100279564 (376 aa)
     
  0.986
GRMZM2G095095_P01
Annotation not available (122 aa)
     
  0.985
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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