• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G401869_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G401869_P01" - BEACH domain-containing protein B in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G401869_P01BEACH domain-containing protein B (1940 aa)    
Predicted Functional Partners:
GRAS79
GRAS transcription factor; Belongs to the GRAS family (718 aa)
           
  0.743
TIDP3734
Pathogenicity protein PATH531-like protein (191 aa)
           
  0.743
GRMZM2G416426_P01
Low phytic acid3 (580 aa)
           
  0.742
541645
Cell division topological specificity factor homolog chloroplastic (228 aa)
           
  0.652
adh1
Alcohol dehydrogenase 1 (388 aa)
           
  0.480
IDP1458
Dynamin-like protein ARC5; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (758 aa)
           
  0.459
pza00424
annotation not available (1060 aa)
     
   
  0.435
tdsgR40C01
annotation not available (1053 aa)
     
   
  0.435
y9
15-cis-zeta-carotene isomerase, chloroplastic; Isomerase involved in the biosynthesis of carotenoids. Catalyzes the cis- to trans-conversion of the 15-cis-bond in 9,15,9’-tri-cis-zeta-carotene (366 aa)
           
  0.420
GRMZM5G804064_P01
ATP-dependent RNA helicase DRS1 ; Belongs to the DEAD box helicase family (770 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (8%) [HD]