STRINGSTRING
Zm.139256 protein (Zea mays) - STRING interaction network
"Zm.139256" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.139256Uncharacterized protein (745 aa)    
Predicted Functional Partners:
rop2
Rho-related protein from plants 2 (197 aa)
       
  0.758
Zm.145223
Rho-related protein from plants 9 (197 aa)
       
  0.758
rop1
Hypothetical protein LOC100216930 (451 aa)
       
  0.758
Zm.449
Rho-related protein from plants 4 (197 aa)
       
  0.758
rop6
Rop6 protein (212 aa)
       
  0.758
rop5
Rho-related protein from plants 5 (215 aa)
       
  0.758
Zm.448
Rop3 small GTP binding protein (217 aa)
       
  0.758
GTPase
GTPase protein (214 aa)
       
  0.758
rop7
Rho-related protein from plants 7 (212 aa)
       
  0.758
GRMZM2G024834_P02
Putative glycogen synthase kinase family protein (663 aa)
     
  0.428
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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