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Zm.25003 protein (Zea mays) - STRING interaction network
"Zm.25003" - Hypothetical protein LOC100277394 in Zea mays
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Zm.25003Hypothetical protein LOC100277394 (577 aa)    
Predicted Functional Partners:
RNC1
Chloroplast ribonuclease III domain protein ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)
     
   
  0.759
CAF1
CRS2-associated factor 1, chloroplastic Precursor (Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1); Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (392 aa)
     
   
  0.621
WHY1
LOC100170235 ; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs (266 aa)
     
   
  0.579
CFM3
CRM family member 3 ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2 (PubMed-18799595). May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
     
   
  0.569
Zm.23980
Pentatricopeptide repeat-containing protein At1g30610, chloroplastic-like (956 aa)
     
   
  0.551
cl36914_1
LOC100281604 (362 aa)
           
  0.526
Zm.33605
Pentatricopeptide repeat-containing protein At2g15820-like (783 aa)
     
   
  0.497
Zm.44689
Lethal embryo mutant1 (224 aa)
           
  0.469
GRMZM2G466032_P01
Annotation not available (86 aa)
           
  0.461
tha8
Thylakoid assembly8 (263 aa)
           
  0.461
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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