STRINGSTRING
Zm.22009 protein (Zea mays) - STRING interaction network
"Zm.22009" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.22009Uncharacterized protein (790 aa)    
Predicted Functional Partners:
Zm.20798
Kinesin-like calmodulin-binding protein homolog (1288 aa)
       
 
  0.830
GRMZM2G070273_P01
Kinesin-like calmodulin binding protein (1182 aa)
       
 
  0.799
GRMZM2G165506_P02
Pollen-specific protein C13 (172 aa)
     
        0.772
AY110473
Hypothetical protein LOC100279500 (1064 aa)
     
        0.768
GRMZM2G097739_P01
Cysteine-type endopeptidase/ ubiquitin thiolesterase (495 aa)
     
        0.764
GRMZM2G176340_P01
Hypothetical protein LOC100191954 (436 aa)
     
        0.721
umc2111
LOC100282844 (207 aa)
     
        0.623
Zm.295
Fae2 protein (515 aa)
     
        0.615
Zm.84317
Hypothetical protein LOC100193099 (LOC100193099), mRNA (243 aa)
     
        0.603
Zm.102456
Phosphoribosylanthranilate transferase (774 aa)
     
        0.594
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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