STRINGSTRING
GRMZM2G406643_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G406643_P01" - Ubiquitin-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G406643_P01Ubiquitin-like (141 aa)    
Predicted Functional Partners:
GRMZM2G450937_P07
60S ribosomal protein L19-3 (989 aa)
     
  0.999
GRMZM2G701288_P01
Uncharacterized protein (467 aa)
     
  0.999
GRMZM2G067974_P03
Hypothetical protein LOC100278397 (LOC100278397), mRNA (491 aa)
     
  0.999
GRMZM5G881775_P02
40S ribosomal protein S19Putative uncharacterized protein ; (145 aa)
     
  0.999
GRMZM2G135177_P01
Hypothetical protein LOC100192949 (145 aa)
     
  0.999
GRMZM2G454261_P01
Annotation not available (104 aa)
     
  0.999
GRMZM2G376619_P01
Uncharacterized protein (266 aa)
     
  0.999
GRMZM2G155931_P01
60S ribosomal protein L32 Fragment (133 aa)
     
  0.999
GRMZM2G115901_P01
60S ribosomal protein L32 Fragment (133 aa)
     
  0.999
GRMZM2G065868_P04
Hypothetical protein LOC100280220 (134 aa)
     
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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