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STRINGSTRING
nced2 protein (Zea mays) - STRING interaction network
"nced2" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nced2annotation not available (430 aa)    
Predicted Functional Partners:
sca1
Short chain alcohol dehydrogenase1; Sex determination protein tasselseed-2 (283 aa)
         
  0.954
zds1
Zeta-carotene desaturase, chloroplastic/chromoplastic; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (572 aa)
           
  0.735
GRMZM5G872934_P01
Aldehyde oxidase/xanthine dehydrogenase molybdopterin binding protein (293 aa)
   
   
  0.645
pds1
Phytoene dehydrogenase, chloroplastic/chromoplastic; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene; Belongs to the carotenoid/retinoid oxidoreductase family (571 aa)
           
  0.620
y9
15-cis-zeta-carotene isomerase, chloroplastic; Isomerase involved in the biosynthesis of carotenoids. Catalyzes the cis- to trans-conversion of the 15-cis-bond in 9,15,9’-tri-cis-zeta-carotene (366 aa)
           
  0.613
ao5
annotation not available (1217 aa)
     
   
  0.531
PS1
Lycopene beta-cyclase; Uncharacterized protein (490 aa)
           
  0.524
103629366
Phytoene synthase (304 aa)
           
  0.519
GRMZM6G699895_P01
annotation not available (171 aa)
   
     
  0.514
pco073706b
Mevalonate kinase; Uncharacterized protein (405 aa)
           
  0.490
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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