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STRINGSTRING
GRMZM2G408216_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G408216_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G408216_P01annotation not available (583 aa)    
Predicted Functional Partners:
100281329
50S ribosomal protein L5 (283 aa)
     
        0.890
GRMZM2G068982_P01
Methionine aminopeptidase (341 aa)
   
        0.877
100382076
Pentatricopeptide repeat-containing protein (513 aa)
     
        0.857
103651490
annotation not available (601 aa)
     
        0.857
100283907
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family (345 aa)
     
        0.854
ERA1
GTPase ERA1, chloroplastic; Nuclear genome-encoded probable GTPase involved in ribosome biogenesis in chloroplasts. Plays a role in 16S rRNA maturation in plastids and may contribute to the assembly of the small (30S) ribosomal subunit (416 aa)
   
   
  0.852
rnp1
RNA binding protein 1 (267 aa)
     
      0.848
100285364
Ribonucleoprotein A (268 aa)
     
      0.848
103641124
Pentatricopeptide repeat*-59040; Plastid transcriptionally active 12-like protein (600 aa)
     
        0.848
100282980
Plastid-specific 30S ribosomal protein 2 (251 aa)
     
      0.842
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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