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STRINGSTRING
gpm643 protein (Zea mays) - STRING interaction network
"gpm643" - Cyclin12 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm643Cyclin12; Belongs to the cyclin family (324 aa)    
Predicted Functional Partners:
cl17437_1
Cell division cycle 2-like protein kinase 6; Belongs to the protein kinase superfamily (471 aa)
     
 
  0.991
100217154
Mediator of RNA polymerase II transcription subunit 18 (217 aa)
     
 
  0.986
100279374
Mediator of RNA polymerase II transcription subunit 14 (1724 aa)
     
 
  0.982
MED6.1
RNA polymerase transcriptional regulation mediator subunit 6; RNA polymerase transcriptional regulation mediator subunit 6 isoform 1; RNA polymerase transcriptional regulation mediator subunit 6 isoform 2; Uncharacterized protein (249 aa)
     
 
  0.973
100193504
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (232 aa)
     
 
  0.962
100383822
Mediator of RNA polymerase II transcription subunit 21 (164 aa)
     
 
  0.954
MED7.2
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (174 aa)
     
 
  0.939
GRMZM2G061672_P02
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery (174 aa)
     
 
  0.939
GRMZM2G110500_P01
Mediator complex subunit 10 CG5057-PA (187 aa)
     
 
  0.937
100284160
Mediator complex subunit 10 CG5057-PA (190 aa)
     
 
  0.937
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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