STRINGSTRING
platz1 protein (Zea mays) - STRING interaction network
"platz1" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
platz1Uncharacterized protein (231 aa)    
Predicted Functional Partners:
cl3497_1
LOC100285734 (593 aa)
           
  0.721
cl29192_1
LOC100285866 (179 aa)
           
  0.627
MBF1.2
Hypothetical protein LOC100273208 (142 aa)
           
  0.570
HMGIY2
High mobility group I/Y-2 ; Binds A/T-rich DNA (e.g. present in the storage gamma- zein gene promoter) with a highly dynamic distribution into the nucleus (PubMed-19781672, PubMed-10864924). Probably involved in endosperm development, during cells shift from a mitotic cycle to endoreduplication leading to massive synthesis of storage proteins (zeins) and starch (PubMed-10864924) (193 aa)
           
  0.463
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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