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pds1 protein (Zea mays) - STRING interaction network
"pds1" - Phytoene dehydrogenase, chloroplastic/chromoplastic in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pds1Phytoene dehydrogenase, chloroplastic/chromoplastic; This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11’ positions of phytoene; Belongs to the carotenoid/retinoid oxidoreductase family (571 aa)    
Predicted Functional Partners:
y9
15-cis-zeta-carotene isomerase, chloroplastic; Isomerase involved in the biosynthesis of carotenoids. Catalyzes the cis- to trans-conversion of the 15-cis-bond in 9,15,9’-tri-cis-zeta-carotene (366 aa)
   
 
  0.998
zds1
Zeta-carotene desaturase, chloroplastic/chromoplastic; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (572 aa)
   
 
0.994
psy2
Phytoene synthase 2 isoform 1; Phytoene synthase 2 isoform 2 (402 aa)
   
 
  0.993
y1
Phytoene synthase, chloroplastic; Catalyzes the reaction from prephytoene diphosphate to phytoene (414 aa)
   
 
  0.992
PS1
Lycopene beta-cyclase; Uncharacterized protein (490 aa)
     
   
  0.982
CRTISO1
Carotenoid isomerase 1 (587 aa)
   
   
  0.937
100281366
Violaxanthin de-epoxidase (446 aa)
     
   
  0.908
crti2
Carotenoid isomerase 2 (462 aa)
   
   
  0.882
dxs1
Deoxy xylulose synthase 1 (719 aa)
     
   
  0.870
GRMZM2G468367_P01
annotation not available (492 aa)
     
 
  0.865
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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