STRINGSTRING
cl33987_1 protein (Zea mays) - STRING interaction network
"cl33987_1" - LOC100281124 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl33987_1LOC100281124 (207 aa)    
Predicted Functional Partners:
pco090197
LOC100281371 (213 aa)
     
  0.985
GRMZM2G070693_P01
Hypothetical protein LOC100194123 (213 aa)
     
  0.985
GRMZM2G147046_P01
Hypothetical protein LOC100273391 (213 aa)
     
0.973
pco090181a
Hypothetical protein LOC100216616 (213 aa)
     
0.973
Zm.25478
Hypothetical protein LOC100279182 (1104 aa)
       
 
  0.879
Zm.37617
GPI ethanolamine phosphate transferase 2 (980 aa)
       
      0.878
sar1
Hypothetical protein LOC100279736 (193 aa)
     
  0.803
GRMZM2G472887_P01
Annotation not available (517 aa)
     
      0.800
GRMZM2G385599_P02
Annotation not available (540 aa)
     
      0.800
GRMZM2G326226_P01
Uncharacterized protein (972 aa)
     
      0.800
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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