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SBP25 protein (Zea mays) - STRING interaction network
"SBP25" - Squamosa promoter-binding-like protein 11 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBP25Squamosa promoter-binding-like protein 11 (440 aa)    
Predicted Functional Partners:
Zm.133922
Solanesyl-diphosphate synthase 1, mitochondrial-like (304 aa)
           
  0.721
GRMZM2G095562_P01
Hypothetical protein LOC100382481 (483 aa)
           
  0.721
gpm105
LOC100194386 (446 aa)
           
  0.721
GRMZM2G014508_P02
Hypothetical protein LOC100279314 (428 aa)
           
  0.721
ZCN1
LOC100037785 (173 aa)
           
  0.566
KNOX4
Homeobox protein knotted-1-like 4 Fragment ; Probably binds to the DNA sequence 5’-TGAC-3’ (360 aa)
           
  0.526
Zm.7856
Hypothetical protein LOC100384826 (LOC100384826), mRNA (470 aa)
           
  0.520
Zm.118187
2-cys peroxiredoxin BAS1 (260 aa)
           
  0.467
pco105988a
Constans (428 aa)
           
  0.465
Zm.96437
Uncharacterized LOC100381877 (687 aa)
           
  0.408
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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