• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
GRMZM2G414848_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G414848_P01" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G414848_P01Uncharacterized protein (170 aa)    
Predicted Functional Partners:
100191802
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (439 aa)
     
      0.877
AY106269
Synaptic glycoprotein SC2 (455 aa)
       
      0.850
100276798
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
     
      0.756
pco109407
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
     
      0.756
100217058
SecY protein transport family protein; Belongs to the SecY/SEC61-alpha family (475 aa)
     
      0.756
pco130904
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (280 aa)
     
   
  0.644
100285648
Preprotein translocase secY subunit; Uncharacterized protein ; Belongs to the SecY/SEC61-alpha family (524 aa)
     
      0.598
csy1
Preprotein translocase subunit SECY, chloroplastic; The central subunit of the protein translocation channel SecYE. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug (By similarity) (553 aa)
     
      0.598
pco061776
Protein DECREASED SIZE EXCLUSION LIMIT 1 (402 aa)
           
  0.586
GRMZM5G839114_P01
annotation not available (456 aa)
           
  0.541
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]