STRINGSTRING
ipt3B protein (Zea mays) - STRING interaction network
"ipt3B" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipt3BUncharacterized protein (354 aa)    
Predicted Functional Partners:
GRMZM2G136892_P01
Annotation not available (451 aa)
   
   
  0.724
GRMZM2G112499_P01
Annotation not available (442 aa)
   
   
  0.724
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
         
  0.721
CKX8
Cytokinin dehydrogenase 8 (539 aa)
           
  0.721
CKX4b
Cytokinin dehydrogenase 4b (534 aa)
           
  0.721
HK1a2
Histidine kinase (975 aa)
         
  0.720
CKX12
Cytokinin dehydrogenase 12 (528 aa)
           
  0.720
gpm91
LOC541632 (262 aa)
           
  0.716
Zm.158898
Hypothetical protein LOC100275473 (378 aa)
   
   
  0.703
GRMZM2G101460_P02
Hypothetical protein LOC100279198 (588 aa)
   
   
  0.669
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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