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STRINGSTRING
GRMZM2G416426_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G416426_P01" - Low phytic acid3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G416426_P01Low phytic acid3 (580 aa)    
Predicted Functional Partners:
cl27985_1a
Inducer of CBF expression 2 (377 aa)
       
 
  0.822
103648024
annotation not available (519 aa)
       
 
  0.822
bhlh130
Putative HLH DNA-binding domain superfamily protein (518 aa)
       
 
  0.822
nfc102
Nucleosome/chromatin assembly factor C; WD repeat-containing protein RBAP1 (1391 aa)
       
 
  0.787
542087
Nucleosome/chromatin assembly factor group C; Uncharacterized protein (453 aa)
       
 
  0.787
GRAS79
GRAS transcription factor; Belongs to the GRAS family (718 aa)
           
  0.743
GRMZM2G401869_P01
BEACH domain-containing protein B (1940 aa)
           
  0.742
TIDP3734
Pathogenicity protein PATH531-like protein (191 aa)
           
  0.742
GRMZM2G126541_P01
Carboxypeptidase; Belongs to the peptidase S10 family (521 aa)
           
  0.719
hda108
Histone deacetylase ; Belongs to the histone deacetylase family. HD Type 1 subfamily (458 aa)
       
 
  0.698
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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