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Zm.28187 protein (Zea mays) - STRING interaction network
"Zm.28187" - Uncharacterized LOC103643664 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.28187Uncharacterized LOC103643664 (1050 aa)    
Predicted Functional Partners:
Zm.16575
Hypothetical protein LOC100193462 (1596 aa)
     
   
  0.736
Zm.10792
Hypothetical protein LOC100280420 (837 aa)
           
  0.721
Zm.101741
Hypothetical protein LOC100276197 (119 aa)
           
  0.721
GRMZM2G110739_P01
MLO-like protein ; May be involved in modulation of pathogen defense and leaf cell death (439 aa)
           
  0.721
GRMZM2G055992_P01
Hypothetical protein LOC100274964 (577 aa)
           
  0.721
Zm.13842
LOC100280553 (341 aa)
           
  0.721
lyce1
Hypothetical protein LOC100216601 (755 aa)
           
  0.721
AC196066.3_FGP003
DUF21 domain-containing protein At1g55930, chloroplastic-like (226 aa)
           
  0.721
GRMZM2G055699_P01
Hypothetical protein LOC100279348 (532 aa)
           
  0.567
HYD3
Beta-carotene hydroxylase (319 aa)
           
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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