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STRINGSTRING
GRMZM2G417223_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G417223_P01" - Nucleic acid binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G417223_P01Nucleic acid binding protein (637 aa)    
Predicted Functional Partners:
GRMZM2G019863_P01
Flowering locus D (808 aa)
           
  0.705
100193418
RNA-binding (RRM/RBD/RNP motifs) family protein (306 aa)
       
 
  0.672
103650799
Luminidependens protein1; Flowering-time protein isoform beta (1157 aa)
           
  0.654
GRMZM2G416426_P01
Low phytic acid3 (580 aa)
       
 
  0.640
GRMZM2G312738_P01
annotation not available (925 aa)
       
 
  0.640
AC190915.3_FGP007
annotation not available (180 aa)
       
 
  0.640
AC203535.4_FGP001
CDC5 protein (925 aa)
     
      0.634
103633041
annotation not available (947 aa)
     
 
  0.604
103646054
annotation not available (1065 aa)
     
 
  0.554
100383162
RNA binding (735 aa)
       
 
  0.546
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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