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Zm.45295 protein (Zea mays) - STRING interaction network
"Zm.45295" - Protein ROOT PRIMORDIUM DEFECTIVE 1 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.45295Protein ROOT PRIMORDIUM DEFECTIVE 1 (455 aa)    
Predicted Functional Partners:
GRMZM2G037694_P01
Hypothetical protein LOC100191341 (470 aa)
           
  0.547
GRMZM2G128477_P01
Hypothetical protein LOC100280249 (428 aa)
           
  0.545
GRMZM2G145085_P01
Transcription initiation factor IIF subunit alpha-like (531 aa)
           
  0.481
pco081507
LOC100282440 (531 aa)
           
  0.481
GRMZM2G173100_P01
Annotation not available (132 aa)
           
  0.463
GRMZM2G113607_P01
Annotation not available (85 aa)
           
  0.463
AC233934.1_FGP001
Annotation not available (131 aa)
           
  0.463
Zm.23866
Hypothetical protein LOC100275588 (569 aa)
           
  0.447
GRMZM2G440349_P01
Pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like (865 aa)
           
  0.410
Zm.84598
Hypothetical protein LOC100194268 (293 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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