STRINGSTRING
Atg8b protein (Zea mays) - STRING interaction network
"Atg8b" - Autophagy-related 8c in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atg8bAutophagy-related 8c (120 aa)    
Predicted Functional Partners:
GRMZM2G056645_P01
Hypothetical protein LOC100381565 (2552 aa)
     
 
  0.999
Atg7
Autophagy-related 7 (1021 aa)
     
  0.998
atg5
Autophagy protein 5 ; Required for autophagy (374 aa)
       
  0.982
Zm.9664
Putative uncharacterized protein (842 aa)
       
  0.981
ATG3
LOC100240689 (311 aa)
     
  0.979
GRMZM2G490260_P01
Annotation not available (49 aa)
     
  0.979
GRMZM2G392624_P02
Uncharacterized LOC103644611 (575 aa)
     
  0.979
GRMZM2G155177_P01
Uncharacterized protein (169 aa)
     
  0.979
GRMZM2G112278_P01
Uncharacterized protein (239 aa)
     
  0.979
GRMZM2G063355_P01
Autophagy-related protein 3-like (233 aa)
     
  0.979
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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