STRINGSTRING
Zm.19669 protein (Zea mays) - STRING interaction network
"Zm.19669" - E3 ubiquitin-protein ligase KEG-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.19669E3 ubiquitin-protein ligase KEG-like (1681 aa)    
Predicted Functional Partners:
GRMZM2G020073_P01
Uncharacterized protein (671 aa)
     
  0.984
GRMZM2G700533_P01
Annotation not available (162 aa)
   
  0.980
Zm.18160
ABA response element binding factor (LOC100285149), mRNA (412 aa)
       
 
  0.973
Zm.151572
Uncharacterized protein (511 aa)
       
  0.972
GRMZM5G822426_P02
Hypothetical protein LOC100193843 (459 aa)
   
  0.964
GRMZM2G166612_P01
Uncharacterized protein (670 aa)
   
  0.963
GRMZM2G135089_P01
Annotation not available (670 aa)
   
  0.963
GRMZM2G112659_P01
Hypothetical protein LOC100191407 (675 aa)
   
  0.963
GRMZM2G374044_P02
Uncharacterized protein (773 aa)
   
  0.961
gata34
Putative uncharacterized protein (1460 aa)
     
  0.961
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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