STRINGSTRING
cl16265_1 protein (Zea mays) - STRING interaction network
"cl16265_1" - Pentatricopeptide in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl16265_1Pentatricopeptide (PPR) repeat protein-like (340 aa)    
Predicted Functional Partners:
GRMZM5G853854_P04
Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 (399 aa)
 
     
  0.576
100282532
DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide (142 aa)
   
   
  0.561
IDP1468
DNA-directed RNA polymerases II IV and V subunit 6A (142 aa)
   
   
  0.561
umc2711
Uncharacterized protein (300 aa)
         
  0.529
eps1
3-phosphoshikimate 1-carboxyvinyltransferase ; Belongs to the EPSP synthase family (390 aa)
   
     
  0.517
GRMZM2G470382_P01
annotation not available (669 aa)
         
  0.502
GRMZM2G374596_P01
annotation not available (292 aa)
         
  0.502
pco073706b
Mevalonate kinase; Uncharacterized protein (405 aa)
         
  0.502
100384063
Mevalonate kinase (431 aa)
         
  0.502
rps2
30S ribosomal protein S2, chloroplastic (236 aa)
 
     
  0.498
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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