STRINGSTRING
SCL25A protein (Zea mays) - STRING interaction network
"SCL25A" - Hypothetical protein LOC100193374 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL25AHypothetical protein LOC100193374 (216 aa)    
Predicted Functional Partners:
TIDP3541
Hypothetical protein LOC100191156 (283 aa)
       
 
  0.941
GRMZM2G390729_P01
Uncharacterized protein (446 aa)
     
 
  0.939
srp32
Hypothetical protein LOC100217203 (285 aa)
     
 
  0.938
GRMZM2G331811_P03
pre-mRNA-splicing factor SF2 (272 aa)
     
 
  0.938
srp31
pre-mRNA-splicing factor SF2 (284 aa)
     
 
  0.938
GRMZM2G073720_P01
Annotation not available (122 aa)
     
 
  0.938
SC30
Hypothetical protein LOC100272438 (274 aa)
       
 
0.938
TIDP3152
Hypothetical protein LOC100272627 (251 aa)
       
 
0.938
GRMZM2G025281_P01
Hypothetical protein LOC100383636 (246 aa)
       
 
0.938
Zm.83356
LOC100282036 (216 aa)
       
 
0.938
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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