STRINGSTRING
pco152633a protein (Zea mays) - STRING interaction network
"pco152633a" - Hypothetical protein LOC100274530 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco152633aHypothetical protein LOC100274530 (146 aa)    
Predicted Functional Partners:
GRMZM2G436038_P01
Annotation not available (340 aa)
   
  0.999
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
  0.999
TIDP2739
LOC100282772 (229 aa)
   
  0.999
Zm.93689
Putative uncharacterized protein (190 aa)
   
  0.999
GRMZM2G179976_P01
Hypothetical protein LOC100273601 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
   
  0.999
RP-P0
60S acidic ribosomal protein P0 ; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (319 aa)
   
  0.999
RPL10
60S ribosomal protein L10 (QM protein homolog) (220 aa)
   
  0.999
S22
40S ribosomal protein S20 Fragment (S22) (126 aa)
   
  0.999
rpl35
60S ribosomal protein L35 (123 aa)
 
  0.999
GRMZM2G313703_P01
Uncharacterized protein (155 aa)
   
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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