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GRMZM2G428179_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G428179_P01" - E3 ubiquitin-protein ligase ATL41 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G428179_P01E3 ubiquitin-protein ligase ATL41; Putative RING zinc finger domain superfamily protein; Uncharacterized protein (237 aa)    
Predicted Functional Partners:
100286029
RING-type E3 ubiquitin transferase (447 aa)
     
   
  0.544
GRMZM2G151204_P01
RING-type E3 ubiquitin transferase; Immediate-early fungal elicitor protein CMPG1 (477 aa)
     
   
  0.464
GRMZM2G142342_P01
Germin-like protein subfamily 3 member 4 (228 aa)
           
  0.400
GRMZM2G405459_P02
annotation not available (357 aa)
           
  0.400
732754
Cysteine proteinase inhibitor; Cystatin; Uncharacterized protein ; Belongs to the cystatin family. Phytocystatin subfamily (129 aa)
           
  0.400
100274196
Bowman-Birk type trypsin inhibitor (248 aa)
           
  0.400
pco087970b
Glycosyl hydrolase superfamily protein; Belongs to the glycosyl hydrolase 17 family (461 aa)
           
  0.400
AC159612.1_FGP007
annotation not available (452 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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