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GRMZM2G430362_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G430362_P01" - ATP-dependent RNA helicase SUV3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G430362_P01ATP-dependent RNA helicase SUV3 (627 aa)    
Predicted Functional Partners:
AC203535.4_FGP001
CDC5 protein (925 aa)
       
      0.772
103646384
annotation not available (442 aa)
           
  0.686
GRMZM2G434669_P01
OJ000126_13.10 protein (248 aa)
           
  0.686
GRMZM2G127173_P01
annotation not available (304 aa)
           
  0.686
107546770
annotation not available (562 aa)
           
  0.685
100192810
Heterogeneous nuclear ribonucleoprotein U-like protein 1 (385 aa)
           
  0.685
AC191050.3_FGP003
annotation not available (562 aa)
           
  0.685
GRMZM2G411893_P01
annotation not available (544 aa)
     
 
  0.663
GRMZM2G405815_P02
DIS3-like exonuclease 2; 3’-5’-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3’ end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3’ (1045 aa)
     
 
  0.641
GRMZM2G400452_P02
annotation not available (516 aa)
     
 
  0.641
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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