STRINGSTRING
Zm.28708 protein (Zea mays) - STRING interaction network
"Zm.28708" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.28708Uncharacterized protein (496 aa)    
Predicted Functional Partners:
GRMZM2G064701_P01
Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 (556 aa)
   
   
  0.534
GRMZM2G161792_P01
Hypothetical protein LOC100381639 (373 aa)
   
   
  0.533
GRMZM2G169261_P01
Hypothetical protein LOC100273207 (382 aa)
   
   
  0.530
Zm.24918
Omega-6 fatty acid desaturase, endoplasmic reticulum-like (384 aa)
   
   
  0.525
GRMZM2G174766_P01
Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like (405 aa)
   
   
  0.519
Zm.87602
Putative uncharacterized protein (820 aa)
           
  0.418
Zm.73322
Hypothetical protein LOC100384764 (LOC100384764), mRNA (930 aa)
           
  0.418
GRMZM2G354558_P01
Omega-3 fatty acid desaturase (402 aa)
     
   
  0.413
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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