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gpm541 protein (Zea mays) - STRING interaction network
"gpm541" - Isocitrate dehydrogenase [NADP] in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm541Isocitrate dehydrogenase [NADP] ; Belongs to the isocitrate and isopropylmalate dehydrogenases family (412 aa)    
Predicted Functional Partners:
100274119
Aspartate aminotransferase (430 aa)
     
  0.967
542698
Isocitrate dehydrogenase [NAD] regulatory subunit 3 mitochondrial; Isocitrate dehydrogenase subunit 1; Uncharacterized protein (377 aa)
   
  0.964
GRMZM2G006672_P02
Isocitrate dehydrogenase [NAD] regulatory subunit 3 mitochondrial (373 aa)
   
  0.964
got2
Aspartate aminotransferase chloroplastic (459 aa)
     
  0.955
100283574
Isocitrate dehydrogenase [NAD] subunit, mitochondrial; 3-isopropylmalate dehydrogenase; Uncharacterized protein (424 aa)
   
  0.953
100191841
Isocitrate dehydrogenase [NAD] subunit, mitochondrial (365 aa)
   
  0.953
GDH1
Glutamate dehydrogenase (411 aa)
     
  0.946
TIDP3354
2-oxoglutarate dehydrogenase E1 component (1025 aa)
     
 
  0.914
100383579
2-oxoglutarate dehydrogenase E1 component (1025 aa)
     
 
  0.914
pco118382
Aspartate aminotransferase (459 aa)
     
  0.901
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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