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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
ipe1 protein (Zea mays) - STRING interaction network
"ipe1" - Irregular pollen exine1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ipe1Irregular pollen exine1 (608 aa)    
Predicted Functional Partners:
GRMZM2G032022_P01
Uncharacterized protein (457 aa)
           
  0.884
GRMZM2G150179_P01
annotation not available (1315 aa)
           
  0.865
103626150
annotation not available (666 aa)
           
  0.836
100192842
annotation not available (562 aa)
           
  0.790
103643475
annotation not available (606 aa)
           
  0.790
100284244
Type III polyketide synthase A; Belongs to the chalcone/stilbene synthases family (390 aa)
     
   
  0.740
100273898
Hydroxyproline-rich glycoprotein family protein; Male sterile45; Splicing factor 3A subunit 2; Uncharacterized protein (323 aa)
           
  0.730
542736
annotation not available (382 aa)
           
  0.716
CPNA
Chaperonin CPN60-2, mitochondrial; Implicated in mitochondrial protein import and macromolecular assembly. May facilitate the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix (576 aa)
           
  0.716
GRMZM2G111477_P01
annotation not available (203 aa)
           
  0.716
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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