STRINGSTRING
CFM3 protein (Zea mays) - STRING interaction network
"CFM3" - CRM family member 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFM3CRM family member 3 ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2 (PubMed-18799595). May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)    
Predicted Functional Partners:
GRMZM5G854199_P01
Uncharacterized protein (405 aa)
       
  0.929
GRMZM5G802854_P01
Exosome complex exonuclease RRP40 (239 aa)
       
  0.830
GRMZM2G173989_P01
Exosome complex exonuclease RRP40 (239 aa)
       
  0.830
GRMZM2G086401_P01
Uncharacterized protein (421 aa)
       
  0.813
e2f14
Transcription factor E2FB-like (548 aa)
       
  0.811
GRMZM2G083620_P01
Hypothetical protein LOC100280057 (240 aa)
       
  0.811
GRMZM2G037855_P01
Annotation not available (126 aa)
       
  0.811
GRMZM2G029733_P01
Annotation not available (70 aa)
       
  0.811
GRMZM2G473891_P01
Uncharacterized protein (612 aa)
       
  0.778
GRMZM5G899926_P02
Hypothetical protein LOC100381531 (249 aa)
       
  0.737
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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