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ca5p10 protein (Zea mays) - STRING interaction network
"ca5p10" - Dr1-associated corepressor in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ca5p10Dr1-associated corepressor (289 aa)    
Predicted Functional Partners:
CADR3
Hypothetical protein LOC100191260 (297 aa)
       
 
  0.961
pco107514
Hypothetical protein LOC100274041 (301 aa)
       
 
  0.961
GRMZM2G466938_P01
TATA-box-binding protein 1-like (189 aa)
       
 
  0.944
tbp2
TATA-box-binding protein 2 (TATA-box factor 2)(TATA-binding factor 2)(TATA sequence-binding protein 2)(TBP-2)(Transcription initiation factor TFIID TBP-2 subunit) (392 aa)
       
 
  0.944
TBP1
TATA-box-binding protein 1 (TATA-box factor 1)(TATA-binding factor 1)(TATA sequence-binding protein 1)(TBP-1)(Transcription initiation factor TFIID TBP-1 subunit); General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre- initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (287 aa)
       
 
  0.944
GRMZM2G092916_P01
Uncharacterized protein (212 aa)
       
 
  0.944
GRMZM2G398845_P02
Annotation not available (162 aa)
       
 
  0.932
GRMZM2G146041_P01
Putative uncharacterized protein (687 aa)
       
 
  0.932
GRMZM2G138125_P01
Hypothetical protein LOC100384583 (1048 aa)
       
 
  0.932
Zm.50096
Uncharacterized protein (1198 aa)
       
 
  0.932
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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