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phd18 protein (Zea mays) - STRING interaction network
"phd18" - Rop guanine nucleotide exchange factor 7-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phd18Rop guanine nucleotide exchange factor 7-like (831 aa)    
Predicted Functional Partners:
GRMZM2G422464_P02
Hypothetical protein LOC100280151 (1904 aa)
       
 
  0.484
Zm.136935
Uncharacterized LOC103630409 (909 aa)
       
 
  0.484
GRMZM2G123587_P01
Uncharacterized protein (1906 aa)
       
 
  0.484
GRMZM2G407406_P01
Fructose-bisphosphate aldolase (233 aa)
       
      0.469
GRMZM2G169998_P01
Hypothetical protein LOC100273064 (565 aa)
           
  0.457
DP2
Diphosphonucleotide phosphatase 2 (512 aa)
           
  0.433
GRMZM2G420310_P01
Hypothetical protein LOC100280437 (592 aa)
           
  0.412
cl15683_1
Hypothetical protein LOC100272502 (586 aa)
           
  0.412
GRMZM2G026231_P01
Hypothetical protein LOC100280437 (596 aa)
           
  0.412
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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