STRINGSTRING
expA4 protein (Zea mays) - STRING interaction network
"expA4" - Alpha-expansin 6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
expA4Alpha-expansin 6 (265 aa)    
Predicted Functional Partners:
Zm.669
Alpha-expansin 5 (294 aa)
           
  0.566
bzip67
Annotation not available (187 aa)
           
  0.563
nac8
Uncharacterized protein (303 aa)
           
  0.563
WRKY57
Uncharacterized protein (380 aa)
           
  0.529
xet1
Xyloglucan endotransglycosylase homolog1 (394 aa)
           
  0.524
Zm.2757
LOC542689 (333 aa)
           
  0.480
WRKY42
Hypothetical protein LOC100279449 (414 aa)
           
  0.470
TPS8
LOC732834 (539 aa)
           
  0.468
m26
M26 protein (228 aa)
           
  0.410
Zm.124969
F-box protein GID2 (236 aa)
           
  0.407
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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