STRINGSTRING
TCP4 protein (Zea mays) - STRING interaction network
"TCP4" - Hypothetical protein LOC100278144 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP4Hypothetical protein LOC100278144 (207 aa)    
Predicted Functional Partners:
cl22372_1b
Hypothetical protein LOC100276130 (396 aa)
       
      0.880
GRMZM2G092910_P01
Hypothetical protein LOC100193861 (397 aa)
       
      0.880
AC225193.3_FGP004
Uncharacterized protein (490 aa)
       
      0.801
Zm.36181
LOC100281433 (515 aa)
       
 
  0.783
TCP5
TCP family transcription factor containing protein (386 aa)
           
  0.721
bHLH39
Hypothetical protein LOC100272246 (285 aa)
           
  0.566
PCNA
Proliferating cell nuclear antigen (PCNA); This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
           
  0.530
ZmPCNA2
Proliferating cell nuclear antigen2 ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
           
  0.523
Zm.22435
Tetratricopeptide repeat protein 13 (363 aa)
       
      0.483
Zm.85762
RADIALIS (96 aa)
           
  0.459
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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