STRINGSTRING
CCD8 protein (Zea mays) - STRING interaction network
"CCD8" - Carotenoid cleavage dioxygenase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCD8Carotenoid cleavage dioxygenase (597 aa)    
Predicted Functional Partners:
CCD7
Carotenoid cleavage dioxygenase (624 aa)
   
 
  0.992
Zm.24813
Uncharacterized protein (638 aa)
   
     
  0.672
GRMZM2G150363_P01
Zeaxanthin 7,8(7’,8’)-cleavage dioxygenase, chromoplast (717 aa)
   
     
  0.668
TERT
Telomerase reverse transcriptase catalytic subunit (1188 aa)
           
  0.624
GRMZM2G158175_P01
Uncharacterized protein (216 aa)
     
   
  0.570
Zm.127440
Hypothetical protein LOC100277925 (262 aa)
     
   
  0.570
PS1
Hypothetical protein LOC100383002 (490 aa)
           
  0.565
MAX1b
Cytochrome P450 monooxygenase (534 aa)
           
  0.565
MAX1a
Hypothetical protein LOC100273597 (528 aa)
           
  0.565
GRMZM2G405203_P01
Hypothetical protein LOC100381787 (705 aa)
           
  0.555
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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