STRINGSTRING
srs6 protein (Zea mays) - STRING interaction network
"srs6" - Hypothetical protein LOC100272637 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srs6Hypothetical protein LOC100272637 (LOC100272637), mRNA (353 aa)    
Predicted Functional Partners:
Zm.84405
Hydroquinone glucosyltransferase (491 aa)
           
  0.714
Zm.122470
Uncharacterized protein (85 aa)
           
  0.714
Zm.120615
5-pentadecatrienyl resorcinol O-methyltransferase-like (247 aa)
           
  0.625
Zm.2685
Indole-3-glycerol phosphate lyase1 (274 aa)
           
  0.566
cl23743_1b
LOC100284406 ; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (303 aa)
           
  0.559
Zm.34237
cyclin-A2 (485 aa)
           
  0.529
GRMZM2G060690_P03
cyclin-A2 (423 aa)
           
  0.529
CYP71C2
Cytochrome P450 71C2 (EC 1.14.-.-)(Protein benzoxazineless 3); Catalyzes the conversion of indolin-2-one to 3- hydroxyindolin-2-one (536 aa)
           
  0.463
IDP2348
LOC100282390 (94 aa)
           
  0.405
GRMZM2G048846_P01
Caltractin (172 aa)
           
  0.405
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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