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GRMZM2G452016_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G452016_P01" - RING-type E3 ubiquitin transferase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G452016_P01RING-type E3 ubiquitin transferase; Putative ARM repeat-containing protein containing family protein; Spotted leaf protein 11; Uncharacterized protein (630 aa)    
Predicted Functional Partners:
IDP295
Chitin elicitor receptor kinase 1 (617 aa)
     
 
  0.782
rs55625579
Putative RING zinc finger domain superfamily protein (318 aa)
           
  0.710
100272915
Putative RING zinc finger domain superfamily protein; Uncharacterized protein (268 aa)
           
  0.710
cl44074_1
KH domain-containing protein SPIN1 (279 aa)
           
  0.613
103636232
Brassinosteroid insensitive1a; Putative leucine-rich repeat receptor-like protein kinase family protein (1122 aa)
       
 
  0.600
542144
MPK4-putative MAPK; Putative MAP kinase family protein isoform 1; Putative MAP kinase family protein isoform 2 (372 aa)
       
 
  0.600
GRMZM2G170591_P04
Anaphase-promoting complex subunit 8 (599 aa)
       
      0.593
IDP689
Putative E3 ubiquitin-protein ligase XBAT31; Ankyrin repeat domain-containing protein 28; Uncharacterized protein (446 aa)
           
  0.588
tdsgR48F08
Putative E3 ubiquitin-protein ligase XBAT31 (494 aa)
           
  0.588
GRMZM2G016668_P02
Ring zinc finger protein (419 aa)
           
  0.588
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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