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STRINGSTRING
cl13598_-2 protein (Zea mays) - STRING interaction network
"cl13598_-2" - Vignain in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl13598_-2Vignain ; Belongs to the peptidase C1 family (484 aa)    
Predicted Functional Partners:
IDP1474
DUF679 domain membrane protein 2 (188 aa)
     
        0.699
100281705
MtN19-like protein (418 aa)
           
  0.514
606466
Pyruvate kinase ; Belongs to the pyruvate kinase family (575 aa)
           
  0.499
GRMZM2G462808_P01
annotation not available (472 aa)
     
   
  0.492
GRMZM2G458441_P01
annotation not available (472 aa)
     
   
  0.492
GRMZM2G442425_P01
Uncharacterized protein (290 aa)
     
   
  0.492
GRMZM2G410085_P01
Cysteine protease (416 aa)
     
   
  0.492
Atg4b
Cysteine protease; Autophagy 4b variant 3; Uncharacterized protein (492 aa)
     
   
  0.492
Atg4a
Cysteine protease; Autophagy-related 4 variant 1; Cysteine protease ATG4B; Uncharacterized protein (492 aa)
     
   
  0.492
100272618
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (336 aa)
   
     
  0.490
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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