STRINGSTRING
Zm.122145 protein (Zea mays) - STRING interaction network
"Zm.122145" - LOC100282352 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.122145LOC100282352 (246 aa)    
Predicted Functional Partners:
Zm.163277
tRNA wybutosine-synthesizing protein 2/3/4 (1080 aa)
           
  0.546
C3H10
Zinc finger CCCH domain-containing protein 24-like (853 aa)
           
  0.454
AC209744.3_FGP001
Hypothetical protein LOC100304266 (175 aa)
   
          0.434
csu3
Hypothetical protein LOC100276728 (LOC100276728), mRNA (245 aa)
           
  0.433
cl2748_2
Hypothetical protein LOC100382448 (750 aa)
           
  0.410
Zm.29568
Probable carboxylesterase 15 (328 aa)
           
  0.410
GRMZM2G166776_P01
Hypothetical protein LOC100274774 (175 aa)
           
  0.410
pco074409
Hypothetical protein LOC100383477 (743 aa)
           
  0.410
Zm.140244
Uncharacterized protein (702 aa)
           
  0.410
GRMZM2G142068_P01
Inactive protein kinase SELMODRAFT_444075-like (828 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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