STRINGSTRING
Zm.84838 protein (Zea mays) - STRING interaction network
"Zm.84838" - HBS1-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.84838HBS1-like protein (417 aa)    
Predicted Functional Partners:
Zm.18320
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (378 aa)
     
 
  0.979
GRMZM2G467943_P01
Uncharacterized protein (1012 aa)
     
  0.967
GRMZM2G025016_P01
Annotation not available (413 aa)
     
  0.967
GRMZM2G400452_P02
Uncharacterized protein (516 aa)
     
  0.965
GRMZM5G802854_P01
Exosome complex exonuclease RRP40 (239 aa)
       
 
  0.955
GRMZM2G173989_P01
Exosome complex exonuclease RRP40 (239 aa)
       
 
  0.955
GRMZM5G841900_P03
3-5 exoribonuclease CSL4 (199 aa)
       
 
  0.954
Zm.96156
Hypothetical protein LOC100280422 (LOC100280422), mRNA (287 aa)
       
 
  0.948
GRMZM2G091595_P01
Putative uncharacterized protein (287 aa)
       
 
  0.948
GRMZM2G040555_P01
Uncharacterized protein (121 aa)
       
 
  0.948
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (12%) [HD]