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GRMZM2G458401_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G458401_P01" - 5'-3' exoribonuclease 3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G458401_P015’-3’ exoribonuclease 3 (893 aa)    
Predicted Functional Partners:
103630321
Decapping nuclease DXO homolog chloroplastic (933 aa)
     
 
  0.943
103633224
annotation not available (960 aa)
     
 
  0.843
GRMZM2G125378_P01
Uncharacterized protein (52 aa)
     
 
  0.842
100194058
Pre-mRNA processing ribonucleoprotein binding region-containing protein (485 aa)
     
 
  0.842
AC203535.4_FGP001
CDC5 protein (925 aa)
     
      0.840
100383056
Protein RRP6-like 2 (901 aa)
     
 
  0.811
100384536
Protein RRP6-like 2 (666 aa)
     
 
  0.811
103649964
annotation not available (1066 aa)
         
 
0.800
cld1
Cold regulated protein homolog1 (1079 aa)
         
 
0.800
GRMZM2G310465_P01
annotation not available (514 aa)
     
 
  0.785
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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