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STRINGSTRING
GATA30 protein (Zea mays) - STRING interaction network
"GATA30" - Putative GATA transcription factor family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA30Putative GATA transcription factor family protein (472 aa)    
Predicted Functional Partners:
GRMZM2G088980_P01
annotation not available (682 aa)
           
  0.766
100192792
Histone H2B (150 aa)
       
 
  0.673
mybr65
Uncharacterized protein (517 aa)
       
 
  0.573
103643187
annotation not available (440 aa)
           
  0.567
100193383
Uncharacterized protein (137 aa)
           
  0.560
GRMZM2G477503_P01
Sulfoquinovosyl transferase SQD2 (297 aa)
           
  0.560
GRMZM2G475536_P01
Uncharacterized protein (162 aa)
           
  0.560
GRMZM2G436295_P01
annotation not available (78 aa)
           
  0.560
100276732
Uncharacterized protein (106 aa)
           
  0.560
GRMZM2G423898_P01
Inhibitor I family protein (69 aa)
           
  0.560
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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