STRINGSTRING
Zm.96388 protein (Zea mays) - STRING interaction network
"Zm.96388" - LOC100274429 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.96388LOC100274429 (pco108434), mRNA (318 aa)    
Predicted Functional Partners:
GRMZM2G702113_P01
DNA-directed RNA polymerases II, IV and V subunit 11-like (68 aa)
   
  0.989
GRMZM2G461244_P01
Annotation not available (752 aa)
   
  0.989
GRMZM2G130207_P01
Hypothetical protein LOC100274213 (120 aa)
   
  0.989
GRMZM2G079596_P01
Uncharacterized protein (208 aa)
   
  0.989
GRMZM2G043461_P01
Uncharacterized protein (120 aa)
   
  0.989
GRMZM2G043394_P01
Uncharacterized protein (75 aa)
   
  0.989
IDP825
DNA-directed RNA polymerase II 36 kDa polypeptide A (328 aa)
     
  0.987
GRMZM2G145085_P01
Transcription initiation factor IIF subunit alpha-like (531 aa)
       
  0.981
pco081507
LOC100282440 (531 aa)
       
  0.981
Zm.121933
Uncharacterized transmembrane protein DDB_G0289901-like (1564 aa)
       
  0.980
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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